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Table 2 Summary of the growth media used for nutritional constraints. Since rich media always contain some TPPM, the set of growth media studied varies with the analysis: TPPM were either analyzed all at once, without vitamins, or only phytohormones, depending on the content of the medium concerned. Details on the composition of the media can be found on gitlab

From: Multi-genome metabolic modeling predicts functional inter-dependencies in the Arabidopsis root microbiome

Growth media

Type

Contains TPPM

With mixture

Analyzed TPPM

M63

Poor

No

No

All

M9

Mineral medium

Hydrogen oxidizing

MBM

Basal

Rich

Vitamins

Amino acids, phyto-hormones

phb pyruvate

MMJS

LB-lennox enriched

Vitamins + amino acids

Tryptone (amino acids) + yeast extract

Phyto-hormones