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Fig. 4 | Microbiome

Fig. 4

From: Time-shifted expression of acetoclastic and methylotrophic methanogenesis by a single Methanosarcina genomospecies predominates the methanogen dynamics in Philippine rice field soil

Fig. 4

Relative abundance changes of the dominant methanogenic families (> 2%) on rRNA (a) and mRNA (b) levels, respectively. Their percentage abundances are given in relation to total archaeal 16S rRNA and mRNA, respectively. Data are means ± SE (n = 3). Asterisks * (PFDR≤0.05), ** (PFDR≤0.01), and *** (PFDR≤0.001) indicate significant differences. Asterisks shown aside from the taxonomic names indicate that in STAMP, the relative rRNA or mRNA abundances significantly changed through the whole incubation period. Asterisks directly shown in the plots indicate that in DESeq2, the rRNA or mRNA abundance in that particular sampling time point significantly differed from the original abundance at the first sampling (day 3). Significance values (PFDR) are only indicated on rRNA and mRNA levels for the taxon-specific abundance peak. The complete set of PFDR values obtained by DESeq2 analysis for all sampling time points is shown in Tables S10 (rRNA) and S11 (mRNA)

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Microbiome

ISSN: 2049-2618

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