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Fig. 2 | Microbiome

Fig. 2

From: The unique gut microbiome of giant pandas involved in protein metabolism contributes to the host’s dietary adaption to bamboo

Fig. 2

Taxonomic annotation and phylogenetic tree of 408 metagenome-assembled genomes (MAGs). A The outermost circle (green) and outer cycle (orange) represent completeness and contamination of MAGs. The different colors of the background of clades represent different bacterial phyla. The tree was constructed using PhyloPhlan (v3.0.2) and visualized using Interactive Tree of Life (iTOL, v6.5.2). B Distribution of completeness and contamination of these MAGs. C Taxonomic classification of MAGs at different levels. D Alignment rate to the MAGs for metagenomic clean reads (MG, N = 125) and meta-transcriptomic clean reads (MT, N = 14). E Alignment rate to the gene collection of giant pandas in the gut for metagenomic clean reads (MG, N = 125) and meta-transcriptomic clean reads (MT, N = 14)

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Microbiome

ISSN: 2049-2618

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