Topological features | Experimental groups |
---|
Uninfected | B. afzelii |
---|
Nodesa | 626 (208)i | 645 (230)i |
Edgesb | 474 | 1008 |
-Positives | 386 | 688 |
-Negatives | 88 | 320 |
Modularityc | 0.908 | 1.476 |
Modulesd | 56 | 45 |
Network diametere | 11 | 11 |
Average degreef | 1.514 | 3.126 |
Weighted degreeg | 0.771 | 0.977 |
Clustering coefficienth | 0.409 | 0.568 |
- aNodes represent bacterial taxa with co-occurrence correlation SparCC > or < − 0.75
- bedges represent the number of connections/correlations
- cmodularity is the strength of division of a network into modules
- dmodules are sub-communities of bacteria that co-occur more frequently among each other than with other taxa
- enetwork diameter is the shortest path between the two most separated nodes
- faverage degree is the average number of links per node
- gweighted degree is the sum of the weight of all the edges connected to a node
- hclustering coefficient is the degree to which nodes in a network tend to form clusters
- itotal nodes and nodes with at least one edge are inside brackets