Table 1 Bacterial MAGs recovered from ISS metagenomic samples treated with PMA
From: Characterization of metagenome-assembled genomes from the International Space Station
Samplea | Species identified | NCBI accession no. of type strain | Type strain | ANI with type strain (%) | CheckM completeness (%) | Identified pipeline (MetaSPAdes and metaWRAP) | Location | Temperature | Relative humidity | Radiation measurements (TEPCb; µGy; total dose/day session) | Sampling date | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
F1-2P | Enterobacter bugandensis | NZ_LT992502.1 | EB-247 | 98.62 | 99.37 | Yes | Waste and hygiene compartment | 22.9 | 40.20 | 268 | 3/4/15 | |
F1-2P | Klebsiella quasipneumoniae | CCDF00000000.1 | 01A030 | 96.60 | 99.40 | MetaWRAP | Waste and hygiene compartment | 22.9 | 40.20 | 268 | 3/4/15 | |
F1-4P | Staphylococcus aureus | NZ_CP035101.1 | ATCC 12600 | 98.25 | 90.81 | MetaSPAdes | Surface of the dining table | 22.9 | 40.20 | 268 | 3/4/15 | |
F1-5P | Pantoea brenneri | MLFN00000000.1 | LMG 24534 | 99.13 | 100.00 | Yes | US node 1, zero-G stowage rack | 26.0 | 40.20 | 268 | 3/4/15 | |
F1-7P | Methylobacterium ajmalii | GCF_016613415.1 | IF7SW-B2 | 99.98 | 100.00 | MetaWRAP | Overhead 3 panel surface of the Materials Science Research Rack 1 | 22.2 | 40.20 | 268 | 3/4/15 | |
F1-8P | Microbacterium aurum | NZ_BCWI00000000.1 | NBRC 15708 | 95.95 | 94.11 | Yes | Crew quarters-2 bump-out exterior aft wall | 22.6 | 40.20 | 268 | 3/4/15 | |
F2-1P | Acinetobacter pittii | BBST00000000.1/ | DSM 25618 | 98.26 | 100.00 | MetaSPAdes | Port panel of the cupola | 22.8 | 39.25 | 380 | 5/15/15 | |
F2-1P | Kocuria palustris | NZ_JAFBCR000000000.1 | DSM 11925 | 98.87 | 100.00 | MetaSPAdes | Port panel of the cupola | 22.8 | 39.25 | 380 | 5/15/15 | |
F2-2P | Staphylococcus saprophyticus | PPRA00000000.1/ | CCUG 38042 | 99.62 | 99.44 | MetaSPAdes | Waste and hygiene compartment | 22.8 | 39.25 | 380 | 5/15/15 | |
F2-5P | Paenibacillus polymyxa | NZ_CP049783.1 | DSM 36 | 98.34 | 99.56 | Yes | US node 1, zero-G stowage rack | 24.7 | 39.25 | 380 | 5/15/15 | |
F2-5P | Pantoea brenneri | MLFN00000000.1 | LMG 24534 | 99.13 | 100.00 | Yes | US node 1, zero-G stowage rack | 24.7 | 39.25 | 380 | 5/15/15 | |
F2-7P | Bacillus velezensis | LHCC00000000.1/ | KCTC 13012 | 98.05 | 90.39 | MetaWRAP | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.8 | 39.25 | 380 | 5/15/15 | |
F2-7P | Methylobacterium ajmalii | GCF_016613415.1 | IF7SW-B2 | 99.98 | 100.00 | Yes | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.8 | 39.25 | 380 | 5/15/15 | |
F2-7P | Sphingomonas sanguinis | BCTY00000000 | NBRC 13937 | 99.71 | 99.42 | Yes | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.8 | 39.25 | 380 | 5/15/15 | |
F2-7P | Staphylococcus saprophyticus | NC_007350.1 | ATCC 15305 | 99.55 | 98.89 | MetaWRAP | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.8 | 39.25 | 380 | 5/15/15 | |
F2-8P | Methylorubrum extorquens | NZ_LT962688.1 | TK 0001 | 96.57 | 98.28 | MetaWRAP | Crew quarters-2 bump-out exterior aft wall | 22.8 | 39.25 | 380 | 5/15/15 | |
F2-8P | Paenibacillus polymyxa | NZ_CP049783.1 | DSM 36 | 98.30 | 99.85 | Yes | Crew quarters-2 bump-out exterior aft wall | 22.8 | 39.25 | 380 | 5/15/15 | |
F2-8P | Staphylococcus aureus | NZ_CP035101.1 | ATCC 12600 | 97.48 | 97.46 | Yes | Crew quarters-2 bump-out exterior aft wall | 22.8 | 39.25 | 380 | 5/15/15 | |
F3-1P | Kalamiella piersonii | NZ_RARB00000000.1 | IIIF1SW-P2 | 99.99 | 89.69 | Yes | Port panel of the cupola | 20.8 | 41.25 | 162 | 5/5/16 | |
F3-2P | Cutibacterium acnes | NZ_CP023676.1 | ATCC 6919 | 99.74 | 91.36 | MetaWRAP | Waste and hygiene compartment | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-2P | Staphylococcus saprophyticus | NC_007350.1 | ATCC 15305 | 99.33 | 96.57 | Yes | Waste and hygiene compartment | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-3P | Klebsiella pneumoniae | JOOW00000000 | ATCC 13883 | 96.55 | 89.66 | MetaSPAdes | The foot platform of the Advanced Resistive Exercise Device | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-3P | Klebsiella quasipneumoniae | NZ_CP012252.1 | 01A030 | 96.59 | 98.47 | MetaWRAP | The foot platform of the Advanced Resistive Exercise Device | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-3P | Staphylococcus saprophyticus | NC_007350.1 | ATCC 15305 | 99.52 | 82.39 | MetaWRAP | The foot platform of the Advanced Resistive Exercise Device | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-4P | Pantoea dispersa | NZ_SCKT00000000.1 | DSM 30073 | 98.00 | 99.33 | Yes | Surface of the dining table | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-4P | Pantoea dispersa | NZ_SCKT00000000.1 | DSM 30073 | 97.89 | 92.92 | Yes | Surface of the dining table | 21.9 | 41.25 | 162 | 5/5/16 | |
F3-5P | Kalamiella piersonii | NZ_RARB00000000.1 | IIIF1SW-P2 | 99.98 | 88.94 | Yes | US node 1, zero-G stowage rack | 27.2 | 41.25 | 162 | 5/5/16 | |
F3-7P | Kalamiella piersonii | NZ_RARB00000000.1 | IIIF1SW-P2 | 99.98 | 87.70 | Yes | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.4 | 41.25 | 162 | 5/5/16 | |
F3-7P | Klebsiella aerogenes | NC_015663.1 | KCTC 2190 | 98.52 | 90.49 | MetaWRAP | Overhead-3 panel surface of the Materials Science Research Rack 1 | 21.4 | 41.25 | 162 | 5/5/16 | |
F3-8P | Kalamiella piersonii | NZ_RARB00000000.1 | IIIF1SW-P2 | 99.98 | 89.38 | Yes | Crew quarters-2 bump-out exterior aft wall | 20.8 | 41.25 | 162 | 5/5/16 | |