Fig. 3

Stability of the chromosome architectures in the gut environment. a The contact map of the entire OMM¹² consortium (5 kb resolution) obtained from fecal samples. The scale bar is indicated on the left and the different organisms on the right. b Comparison of the contact maps for B. coccoides between in vitro (left) and in vivo (right) conditions. c Ratio (Log2) of contact maps of the two maps of B. coccoides shown in panel b. An increase or decrease in contacts is represented in blue (in vitro) or red (in vivo), respectively. d Hierarchical clustering of the different Hi-C replicates for B. coccoides using the software HiCrep