Present study | Other studies | Results present study | Results other studies | Ref. | |||
---|---|---|---|---|---|---|---|
Primer pair | Mean length (bps) | Primer pair name | Bacterial SC (%) | Archaeal SC (%) | Bacterial coverage (%) | Archaeal coverage (%) | |
KP_F044-KP_R023 | 100–300 | S-D-Bact-0337-a-S-20/S-D-Bact-0518-a-A-17 | 87.52 | 0.00 | 80.90 | 0.00 | [17] |
KP_F044-KP_R021 | 100–300 | S-D-Bact-0337-a-S-20/S-D-Bact-0515-a-A-19 | 92.46 | 0.00 | 85.80 | 0.00 | [17] |
KP_F046-KP_R023 | 100–300 | S-D-Bact-0341-a-S-17/S-D-Bact-0518-a-A-17 | 87.52 | 0.00 | 81.30 | 0.00 | [17] |
KP_F046-KP_R021 | 100–300 | S-D-Bact-0341-a-S-17/S-D-Bact-0515-a-A-19 | 92.46 | 0.00 | 86.20 | 0.00 | [17] |
KP_F046-OP_R045 | 100–300 | S-D-Bact-0341-a-S-17/ N/A | 87.52 | 0.00 | 81.50 | 0.00 | [17] |
KP_F047-KP_R021 | 100–300 | S-D-Bact-0341-b-S-17/ S-D-Bact-0515-a-A-19 | 92.59 | 0.00 | 91.20a | 0.00a | [16] |
KP_F056-KP_R032 | 100–300 | S-D-Bact-0564-a-S-15/S-D-Bact-0785-b-A-18 | 96.23 | 8.76 | 89.00a; 83.40b | 14.60a; 0.00b | [16] |
S-D-Bact-0564-a-S-15/S-D-Bact-0785-b-A-18 | 88.10 | 14.40 | [17] | ||||
KP_F058-KP_R053 | 100–300 | S-D-Bact-0784-a-S-19/S-D-Bact-1061-a-A-17 | 84.40 | 0.00 | 78.60 | 0.00 | [17] |
KP_F077-KP_R071 | 100–300 | U341F – 534R | 95.58 | 59.79 | 98.00 | ~ 91.00 | [19] |
KP_F078-OP_R010 | 100–300 | 515F – 806 R (original) | 95.32 | 62.89 | 86.80 | 52.90 | [22] |
S-*-Univ-0515-a-S-19/N/A | 86.10 | 52.00 | [17] | ||||
KP_F078-KP_R037 | 100–300 | S-*-Univ-0515-a-S-19/S-D-Bact-0787-a-A-20 | 87.39 | 0.52 | 77.10 | 0.00 | [17] |
KP_F018-KP_R002 | 100–300 | S-D-Arch-0349-a-S-17/S-D-Arch-0519-a-A-16 | 0.00 | 95.88 | 0.00a; 0.00b | 76.80a; 74.50b | [16] |
KP_F020-KP_R032 | 100–300 | S-D-Arch-0519-a-S-15/S-D-Bact-0785-b-A-18 | 95.58 | 99.48 | 89.10a; 83.40b | 88.00a; 76.50b | [16] |
519F – 785R | 88.80 | 88.90 | [22] | ||||
KP_F020-KP_R035 | 100–300 | S-D-Arch-0519-a-S-15/S-D-Bact-0785-a-A-21 | 95.45 | 98.97 | 87.10a | 86.50a | [16] |
OP_F014-OP_R014 | 100–300 | 515F – 806 R (modified) | 95.32 | 88.14 | 87.70 | 85.70 | [22] |
515F – 806R | 96.20 | 96.39 | [25] | ||||
OP_F066-OP_R073 | 100–300 | N/A/ N/A | 98.31 | 92.78 | 88.90 | 75.30 | [17] |
KP_F044-KP_R032 | 301–600 | S-D-Bact-0337-a-S-20/S-D-Bact-0785-b-A-18 | 94.28 | 0.00 | 84.30 | 0.00 | [17] |
KP_F046-OP_R010 | 301–600 | S-D-Bact-0341-a-S-17/ N/A | 93.89 | 0.00 | 83.30 | 0.10 | [17] |
KP_F047-KP_R035 | 301–600 | S-D-Bact-0341-b-S-17/S-*-D-Bact-0785-a-A-21 | 94.15 | 0.00 | 86.20a; 43.10b | 0.50a; 0.00b | [16] |
341F -805R | 96.69 | 83.59 | [25] | ||||
341F -785R | 96.51 | 82.96 | [21] | ||||
S-D-Bact-0341-b-S-17/S-D-Bact-0785-a-A-21 | 86.00 | 0.50 | [17] | ||||
KP_F049-KP_R033 | 301–600 | S-D-Bact-0347-a-S-19/S-D-Bact-0785-a-A-19 | 76.59 | 0.00 | 76.50a | 0.00a | [16] |
KP_F056-KP_R074 | 301–600 | S-D-Bact-0564-a-S-15/S-Univ-1100-a-A-15 | 97.27 | 7.73 | 92.70a; 76.20b | 8.00a; 0.00b | [16] |
OP_F021-OP_R050 | 301–600 | N/A / N/A | 91.68 | 1.03 | 86.50 | 0.50 | [17] |
KP_F020-KP_R013 | 301–600 | S-D-Arch-0519-a-S-15/S-D-Arch-1041-a-A-18 | 0.00 | 95.88 | 0.00a | 76.60a | [16] |
KP_F032-KP_R063 | >600 | S-D-Bact-0008-b-S-20/S-D-Bact-1492-a-A-16 | 60.47 | 0.00 | 17.30 | 0.00 | [17] |
KP_F033-KP_R060 | >600 | S-D-Bact-0008-c-S-20/S-D-Bact-1391-a-A-17 | 74.90 | 0.00 | 78.00a | 0.10a | [16] |
KP_F033-KP_R050 | >600 | S-D-Bact-0008-c-S-20/S-D-Bact-1046-a-A-19 | 72.56 | 0.00 | 81.30a | 0.00a | [16] |
KP_F047-KP_R053 | >600 | S-D-Bact-0341-b-S-17/S-D-Bact-1061-a-A-17 | 93.11 | 0.00 | 91.90a; 58.90b | 0.00a; 0.00b | [16] |
KP_F051-KP_R057 | >600 | S-D-Bact-0515-a-S-16/S-D-Bact-1100-a-A-15 | 82.70 | 0.00 | 77.30 | 0.00 | [17] |
KP_F018-KP_R078 | >600 | S-D-Arch-0349-a-S-17/S-*-Univ-1392-a-A-15 | 0.00 | 93.30 | 0.00a | 65.80a | [16] |
KP_F059-KP_R078 | >600 | S-D-Bact-0785-a-S-18/S-*-Univ-1392-a-A-15 | 93.63 | 96.39 | 74.10a | 72.30a | [16] |