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Fig. 4 | Microbiome

Fig. 4

From: Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

Fig. 4

Overview of metatranscriptomic analysis. A Rarefaction analysis showing the number of enzymes detected (as defined by unique EC numbers) as a function of read depth for ceca and jejunum samples. B Principal component analysis (PCA) based on annotated microbial gene expression in ceca samples. Each node represents an individual ceca sample (see inset key for type of sample). C Overlap of significantly differentially expressed genes across ceca samples, comparing AGP treatments (left) and diet (right)

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