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Table 1 Principal component mixed effect regression to evaluate whether baseline microbiota independently predicts Δm

From: Gut microbiota response to antibiotics is personalized and depends on baseline microbiota

Variable

Regression coefficient

Standard error

p

Baseline microbiota PC1

0.82

0.35

0.01

Antibiotic PC1

− 1.90

0.77

0.01

Interval from baseline (days)

0.98

0.12

< 0.01

Baseline Shannon index

− 5.70

4.19

0.19

Sample read depth

0.88

1.96

0.54

Parenteral nutrition

3.60

3.38

0.37

  1. PC principal component; Δm, Aitchison distance between the baseline and subsequent microbiota