Table 1 Summary of metagenomic assembled genomes (MAGs) in rainbow trout skin
From: Circadian dynamics of the teleost skin immune-microbiome interface
Bin ID | Amphora2 phylotype | Size (Mbp) | No. of contigs | No. of genes | CheckM completion (%) | CheckM contamination (%) |
|---|---|---|---|---|---|---|
bin.14 | Unknown Rhizobiales sp. 1 | 4.36 | 220 | 349 | 99.13 | 1.37 |
bin.16 | Unknown Oxalobacteraceae sp. 1 | 6.34 | 83 | 574 | 95.52 | 1.00 |
bin.15 | Variovorax paradoxus 1 | 6.23 | 236 | 427 | 93.84 | 2.58 |
bin.20 | Unknown Oxalobacteraceae sp. 2 | 5.45 | 683 | 574 | 92.89 | 1.42 |
bin.12 | Microbacterium testaceum 1 | 3.4 | 100 | 400 | 92.22 | 1.77 |
bin.17 | Microbacterium testaceum 2 | 3.51 | 85 | 400 | 90.88 | 2.98 |
bin.11 | Pseudomonas sp. | 4.39 | 31 | 813 | 84.74 | 1.19 |
bin.4 | Variovorax paradoxus 2 | 6.19 | 287 | 427 | 82.69 | 0.71 |
bin.19 | Unknown Moraxellaceae sp. | 1.74 | 338 | 451 | 70.41 | 2.05 |
bin.10 | Unknown Rhizobiales sp. 2 | 2.48 | 556 | 408 | 64.70 | 0.82 |
bin.3 | Flavobacterium sp. | 2.29 | 482 | 511 | 61.54 | 0.79 |