Skip to main content
Fig. 6 | Microbiome

Fig. 6

From: SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities

Fig. 6

PCoA analysis for various samples fed on different feeds. Figure visualises four Principal Coordinates Analysis (PCoA) plots for Bray–Curtis dissimilarity measures for different samples (inoculum, real salmon, and SalmoSim), different sampling time points from SalmoSim system, different biological replicates, and different feeds. A represents all sequenced data together (all real salmon, inoculum, and all 3 biological SalmoSim runs) in which different colours represent different samples (real salmon, inoculum, and 3 different SalmoSim biological replicates (Fish 1, Fish 2, Fish 3)) and different shapes represent different feeds, while B–D (subsets of Fig. 6A) represent sequenced data together for real salmon, inoculum, and different biological replicates of SalmoSim (B Fish 7, C Fish 8, D Fish 9). In B–D, different colours represent different samples (inoculum, real salmon, and different sampling points of SalmoSim), different shapes represent samples fed on two different feeds, and samples fed on same feeds were circled manually in dotted circles. Dim 1 is principal coordinate 1, and Dim 2 is principle coordinate 2

Back to article page

Microbiome

ISSN: 2049-2618

Contact us