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Table 2 Validation of the PathoFact pipeline

From: PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

 

Toxin prediction

Virulence factor prediction

AMR prediction

Sensitivity

0.777

0.886

0.963

Specificity

0.989

0.957

0.994

Accuracy

0.832

0.921

0.979