Table 3 Overview of tested libraries: case 2 samples. For the viruses enclosed in the samples, for that no reference genomes were included in the genome set used for the VirBaits design. Sample matrix, animal species, the detected virus, and the references are given. The amount of virus reads in the sequence datasets found in the originally sequenced libraries and in the VirBaits-treated libraries is given as percentage. Libraries were made from RNA except the one marked by an asterisk, which was made from DNA
Library ID | Sample material | Verified virus | Generic HTS | VirBaits | Reference | ||
|---|---|---|---|---|---|---|---|
Total reads | Virus portion | Total reads | Virus portion | Â | |||
L03038 | Brain, Bubo scandiacus | USUV | 4,347,713 | 0.001% | 155,648 | 0.1% | Santos et al., submitted |
L02262 | Spinal cord, Ovis aries | OvPiV | 2,422,322 | 0.06% | 261,673 | 0.04% | [25] |
L01003* | Cell culture supernatant | PeHV | 982,587 | 0.6% | 154.820 | 0.4% | [26] |
L02374 | Organ suspension, bat | KBLV | 5,696,571 | 3.4% | 508,034 | 89.6% | [27] |