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Fig. 6 | Microbiome

Fig. 6

From: Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale

Fig. 6

Analyses of transcription from samples collected in 2016 mapped to the genome set representative of the species level. a Transcription activity of genomes grouped by phylum or class based on total transcript read counts mapped to the representative genomes. Other bacteria: Candidatus Latescibacteria and Eisenbacteria-like bacteria. Phylogeny of the genomes at the species level was confirmed based on a concatenated ribosomal proteins tree (Data S2, Additional File 9). b Average transcription percentile for all genes encoding enzymes involved in a given biogeochemical transformation in each representative genome across all 2016 metatranscriptomes. c Differentially transcribed genes in response to soil OC. Statistically significant (DESeq2; q < 0.05) genes are colored by function, and not significant (n.s.) genes are in grey. d Differentially transcribed genes encoding CAZy in response to soil OC

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Microbiome

ISSN: 2049-2618

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