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Table 1 Ingenuity pathway analysis (IPA)

From: Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

 

Functions annotation

P value

Activation z-score

Molecules

# molecules

Cell-to-cell signalling and Interaction, nervous system development and function

Synaptic transmission

2.83E−11

− 1.763

AMPH, ANKS1B, CAMK2A, CNP, CPNE6, DLG2, DLG4, DPYSL2, ERC2, FBXO2, GNAI2, HNRNPK, MAPT, NAPA, NPTX1, NRCAM, NSF, PAFAH1B1, PARK7, PPP3CA, PPP3R1, PRKCG, PSMC5, RAB3A, S100B, H3GL2, SLC12A5, SLC1A3, SNAP25, SNPH, SYN1, SYN2, SYNGAP1, UNC13A, VDAC1

35

Behaviour

Learning

2.72E−14

− 1.697

ACTG1, AMPH, ATP1A3, CAMK2A, CFL1, CKB, CKMT1A/CKMT1B, CPT1C, CRMP1, CTNND2, DLG3, DLG4, ELAVL4, FBXO2, GMFB, GSK3B, HAPLN1, KCNAB2, MAPT, NCAM1, NCDN, NRAS, NRCAM, NTRK2, PAFAH1B1, PARK7, PDE1B, PEX5L, PPP3CA, PPP3R1, PRKAR1A, PRKAR2B, PRKCG, RTN4, S100B, SHANK1, SLC12A5, SNAP25, SOD2, SRCIN1, SYNGAP1, SYNJ1, SYNPO, TRIM3, TSN, VDAC1

46

Cell-to-cell signalling and interaction, nervous system development and function

Neurotransmission

4.44E−12

− 1.656

AMPH, ANKS1B, CAMK2A, CNP, CPNE6, DLG2, DLG4, DNM1, DPYSL2, ERC2, FBXO2, GDAP1, GNAI2, HNRNPK, KCTD12, MAPT, NAPA, Nefm, NPTX1, NRCAM, NSF, NTRK2, PAFAH1B1, PARK7, PPP3CA, PPP3R1, PRKCG, PSMC5, RAB3A, S100B, SH3GL2, SLC12A5, SLC1A3, SNAP25, SNPH, SRCIN1, SYN1, SYN2, SYNGAP1, UNC13A, VDAC1

41

Cell morphology, cellular assembly and organization, nervous system development and function

Elongation of neurites

4.27E−08

− 0.228

ALCAM, CAMK2A, DPYSL2, GNAS, MAPT, NTRK2, OMG, PACSIN1, PAFAH1B1, PFN1, PFN2, RAB35

12

Behaviour

Locomotion

6.83E−07

− 0.087

ABAT, AGAP2, ATP1A1, ATP1A3, CAMK2A, CNP, DLG3, DLG4, DNM1, ELAVL4, GMFB, HINT1, MAPT, NCAM1, NEFL, NRCAM, NTRK2, OMG, OXR1, PAFAH1B1, PARK7, PDE1B, RTN4, SNAP25, SOD1, SOD2, SPTBN4, TSN

28

  1. Ingenuity pathway analysis (IPA) of the significantly up- and downregulated proteins (after Bonferroni correction) in the hippocampus of young mice transplanted with faeces from aged donors (FMT-aged) versus young mice transplanted with faeces transplant from young age-matched mice (FMT-adult). The enriched categories, related to specific function annotations, the P value, the z-score of the software and the involved proteins are displayed