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Table 1 Haloarchaea-assigned sequences in other publicly available metagenomic and metataxonomic studies

From: The human gut archaeome: identification of diverse haloarchaea in Korean subjects

Accession number Study type Amplified region Study name Haloarchaea-assigned taxon
ERP001956 Metagenomic N/A Diagnostic Metagenomics: A Culture-Independent Approach to the Investigation of Bacterial Infections c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae
SRP001634 Metagenomic N/A Microbial composition of samples from infant gut c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halococcus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halorhabdus; s__
SRP073172 Metagenomic N/A DNA from FIT can replace stool for microbiota-based colorectal c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__; s__
SRP096283 Metagenomic N/A Human gut metagenome and metatranscriptome raw sequence reads c__Halobacteria
SRP118697 Metagenomic N/A Microbiome and Worm Infection c__Halobacteria; o__Halobacteriales
SRP128128 Metagenomic N/A Dynamics of human gut microbiota and metabolites in response to prebiotic interventions c__Halobacteria
c__Halobacteria; o__Halobacteriales
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halobacterium
c__Halobacteria; o__Halobacteriales; f__Halococcaceae; g__Halococcus
c__Halobacteria; o__Natrialbales; f__Natrialbaceae; g__Natronococcus
ERP015450 Metagenomic N/A Dysbiosis of gut microbiota contributes to the pathogenesis of hypertension c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloarcula; s__
ERP005883 Metataxonomic V4 Effects of cholera on the human gut microbiota, and interactions between human gut microbes and Vibrio cholera c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halorubrum; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloterrigena; s__
ERP010229 Metataxonomic V4 Gut microbial succession follows acute secretory diarrhea in humans c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halalkalicoccus; s__jeotgali
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halococcus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halococcus; s__hamelinensis
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halorhabdus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloterrigena; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Natronococcus; s__
ERP021093 Metataxonomic V4 Gut microbiome from patients obtained by 16s rRNA sequencing c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__GA41; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloarcula; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halobacteriaceae; s__GX3
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halobacterium; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halococcus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halomicrobium; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halomicrobium; s__mukohataei
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halonotius; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloplanus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Haloquadratum; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halorhabdus; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halorubrum; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Natronomonas; s__
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__XKL75; s__
c__Halobacteria; o__Halobacteriales; f__MSP41; g__; s__
ERP021896 Metataxonomic V4 Moving pictures of the human microbiome c__Halobacteria; o__Halobacteriales
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halarchaeum
c__Halobacteria; o__Halobacteriales; f__Halobacteriaceae; g__Halobacterium
ERP107577 Metataxonomic V3orV4 LogMPIE: Landscape Of Gut Microbiome - Pan India Exploration c__Halobacteria
c__Halobacteria; o__Haloferacales
c__Halobacteria; o__Haloferacales; f__Haloferacaceae
c__Halobacteria; o__Haloferacales; f__Halorubraceae; g__Haloparvum
c__Halobacteria; o__Natrialbales; f__Natrialbaceae
ERP109659 Metataxonomic V3-V4 Gut microbiota in Parkinson's disease: temporal stability and disease progression c__Halobacteria; o__Halobacteriales
  1. N/A not applicable