Fig. 5

Clustering and LDA analyses of gut microbiome data collected from Duroc [a], Landrace [b], and Large White [c] pigs at three time points 73 days (T1), 123 days (T2), and 158 days (T3) of the feeding trial. (Above) Genera that differentiate enterotypes at each time point. Bar length represents a log₁₀-transformed linear discriminant score. Color corresponds to the enterotype in which a genus was found to be most abundant. (Below) Enterotype clusters identified using Calinski–Harabasz (CH) index maximization