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Fig. 3 | Microbiome

Fig. 3

From: Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

Fig. 3

The FL_Compilation_TS training set provides higher classification percentages with a lower error rate. a The percentage of eHOMD-derived simulated reads classified using the FL_eHOMDrefs_TS training set (purple) versus the FL_Compilation_TS training set (orange). b The percentage of classified reads that were misclassified (i.e., reads for which the assigned taxonomic identity was different than the known identity of the original sequence from which the simulated read was derived). The naïve Bayesian RDP Classifier was used with bootstrap values ranging from 50 to 100

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Microbiome

ISSN: 2049-2618

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