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Fig. 5 | Microbiome

Fig. 5

From: Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer

Fig. 5

Relative abundance distribution of the most abundant functional categories in TMM-normalized metagenome sequencing data from the shotgun metagenome of cultivated microorganisms. a COG annotation (10 most abundant ). b KEGG annotation (10 most abundant). c dbCAN annotation (10 most abundant). The descriptions of the functions displayed in b and c are detailed in Supplementary Table S4. Average from 2 replicates per plate of culture medium. E-amino acid transport and metabolism; G-carbohydrate transport and metabolism; H-coenzyme transport and metabolism; C-energy production and conversion; I-lipid transport and metabolism; F-nucleotide transport and metabolism; Q-secondary metabolites; D-cell cycle; N-cell motility; M-cell wall/membrane/envelope biogenesis; V-defense mechanisms; P-inorganic ion transport and metabolism; U-intracellular trafficking; O-post translational modification; T-signal transduction mechanisms; L-replication, recombination, and repair; K-transcription; J-translation; S-function unknown; R-general function and prediction; X-mobilome

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Microbiome

ISSN: 2049-2618

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