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Fig. 3 | Microbiome

Fig. 3

From: Genomic and transcriptomic evidence of light-sensing, porphyrin biosynthesis, Calvin-Benson-Bassham cycle, and urea production in Bathyarchaeota

Fig. 3

Maximum Likelihood tree of rhodopsin sequences. The scale bar indicates the average number of amino acid substitutions per site. The anchor sequences were from Pushkarev et al. [29]. Sequences were aligned using MUSCLE, columns with more than 95% gaps were trimmed using trimAL. The maximum likelihood tree was built using RAxML 8.0, the number of bootstraps was 1000, and the evolutionary model was LG+GAMMA

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Microbiome

ISSN: 2049-2618

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