Fig. 2

Metagenome assembled genomes (MAGs) and their phylogeny relationships. (a) Phylogenetic tree of 79 MAGs inferred from the phylogenetic signal extracted from 400 taxonomic informative proteins. (b) The completeness and contamination values assessed by CheckM determined using genes that are ubiquitous and single-copy within a phylogenetic lineage. (c) The genome quality was used to classify MAGs according to indications provided by the Genomic Standards Consortium. “H” represents high quality, “M” represents medium quality, and “L” represents low quality. (d) The genome size and N50 value determined considering the contigs assigned to the MAGs. (e) The average coverage and RPKM of each MAG in 9 samples. (f) Taxonomy classification assigned with ANI calculation determined against genomes of microbial isolates deposited at the NCBI database, as well as putative classification according to the phylogenetic signal extracted from 400 taxonomic informative proteins. (g) Taxonomy classification at the phylum level