Table 3 Comparison of LR and SR coverage
From: Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data
Bin | MEGAN assignment | Completeness | GC | LR | SR |
|---|---|---|---|---|---|
longest contig (%) | content (%) | coverage | coverage | ||
B1 | Bacteroidetes bacterium OLB12 | 95 | 43.6 | 57.3 | 117.5 |
B2 | Candidatus Accumulibacter SK-02 | 94 | 61.3 | 384.2 | 707.8 |
B3 | Chlamydiia (class) | 94 | 38.2 | 48.8 | 107.6 |
B4 | Gammaproteobacteria (class) | 93 | 40.5 | 25.1 | 56.2 |
B5 | Bacteroidetes bacterium OLB8 | 93 | 41.2 | 52.1 | 109.9 |
B6 | Rhodospirillales (order) | 92 | 63.6 | 29.5 | 56.1 |
B7 | Chlorobi bacterium OLB5 | 88 | 38.1 | 38.7 | 90.2 |
B8 | Thauera (genus) | 14 | 68.9 | 32.7 | 60.5 |
B9 | Sphingobacteriales bacterium 44-15 | 0 | 40.6 | 10.2 | 23.2 |
B10 | Bacteroidetes (phylum) | 32 | 43.5 | 14.1 | 27.7 |
B11 | Candidatus Contendobacter B J11 | 19 | 62.6 | 15.4 | 22.3 |
B12 | Betaproteobacteria (class) | 10 | 62.9 | 37.1 | 66.0 |
B13 | Nitrospira (genus) | 27 | 60.4 | 17.6 | 28.7 |
B14 | Chloroflexi (phylum) | 8 | 51.8 | 13.3 | 18.9 |