From: Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments
Tool | Microsatellite nucleotides masked (%) | Conserved coding sequence nucleotides masked (%) | Speed (kilobase/second) | Peak memory usage (megabytes) |
---|---|---|---|---|
Komplexity | 54.6 | 0.68 | 10,100 ± 560 | 3.50 ± 0.06 |
RepeatMasker | 57 | 0.75 | 0.64 ± 0.02 | 624 ± 3.0 |
BBMask | 43 | 0.029 | 1690 ± 440 | 385 ± 52 |
DUST | 44.9 | 0.74 | 795 ± 10 | 17.0 ± 0.18 |