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Table 1 Summary of 16S amplicon reads and OTUs assigned across samples and metagenome reads and contigs

From: Metagenomic, phylogenetic, and functional characterization of predominant endolithic green sulfur bacteria in the coral Isopora palifera

Sample GIA GIB GIC GID GIE GIF GIG GIH GII
16S rRNA gene amplicon data
 Raw reads 1606 1993 658 693 993 2119 1753 2247 2281
 Reads without chloroplast and mitochondria 1423 1861 576 616 865 1973 1600 2088 2203
 OTUs 59 49 38 28 55 52 34 50 61
Metagenome data
 Total reads of metagenome 4686274 5179522 5764522 6068974 6121690 6943838 4504458 3907868 5426424
 Contig number 2190 864 469 3260 403 1777 814 467 1477
 Genes (ORF prediction) 13195 6870 1948 17064 587 5998 6133 7155 10033
 Genes (with protein length > = 100 aa) 10861 5605 1359 13953 390 4211 4979 5959 8065