From: Breast cancer in postmenopausal women is associated with an altered gut metagenome
 | P value | q value | Control_mean | Control_sd | Case_mean | Case_sd |
---|---|---|---|---|---|---|
Increased in postmenopausal breast cancer patients | ||||||
 Escherichia_coli | 1.45E−07 | 4.77E−05 | 1.04E−02 | 4.34E−02 | 3.74E−02 | 8.18E−02 |
 Shigella_sp_D9 | 1.86E−07 | 4.77E−05 | 1.80E−06 | 8.35E−06 | 5.36E−06 | 1.50E−05 |
 Escherichia_sp_3_2_53FAA | 3.03E−07 | 4.77E−05 | 6.92E−05 | 2.96E−04 | 2.40E−04 | 5.14E−04 |
 Shigella_sonnei | 3.01E−07 | 4.77E−05 | 4.38E−06 | 1.94E−05 | 1.46E−05 | 3.42E−05 |
 Escherichia_sp_1_1_43 | 6.49E−07 | 8.17E−05 | 2.53E−06 | 1.11E−05 | 8.11E−06 | 1.84E−05 |
 Proteus_mirabilis | 1.53E−06 | 1.61E−04 | 1.94E−06 | 5.26E−06 | 1.46E−03 | 9.47E−03 |
 Shigella_boydii | 2.17E−06 | 1.95E−04 | 3.07E−06 | 1.29E−05 | 1.01E−05 | 2.27E−05 |
 Vibrio_cholerae | 2.66E−06 | 2.09E−04 | 1.18E−06 | 3.46E−06 | 2.95E−05 | 1.17E−04 |
 Escherichia_fergusonii | 1.25E−05 | 8.72E−04 | 3.52E−07 | 1.68E−06 | 1.67E−06 | 3.34E−06 |
 Escherichia_sp_4_1_40B | 1.86E−05 | 1.06E−03 | 1.60E−06 | 7.36E−06 | 4.13E−06 | 1.06E−05 |
 Shigella_flexneri | 1.75E−05 | 1.06E−03 | 2.86E−06 | 1.20E−05 | 1.20E−05 | 4.58E−05 |
 Acinetobacter_baumannii | 5.39E−05 | 2.83E−03 | 1.73E−06 | 5.39E−06 | 1.25E−05 | 5.13E−05 |
 Escherichia_sp_TW09276 | 8.01E−05 | 3.88E−03 | 6.60E−07 | 3.13E−06 | 1.95E−06 | 4.75E−06 |
 Actinomyces_sp_HPA0247 | 9.98E−05 | 4.42E−03 | 2.65E−08 | 9.16E−08 | 1.67E−07 | 3.52E−07 |
 Acinetobacter_johnsonii | 1.23E−04 | 4.46E−03 | 4.28E−08 | 1.64E−07 | 5.64E−06 | 3.32E−05 |
 Providencia_rettgeri | 1.28E−04 | 4.46E−03 | 2.39E−06 | 7.06E−06 | 1.05E−05 | 3.25E−05 |
 Lactobacillus_mucosae | 1.27E−04 | 4.46E−03 | 4.19E−07 | 2.14E−06 | 5.36E−05 | 3.52E−04 |
 unclassified_Citrobacter_sp._30_2 | 2.12E−04 | 7.02E−03 | 1.93E−04 | 1.12E−03 | 6.39E−04 | 2.27E−03 |
 Citrobacter_sp_30_2 | 2.58E−04 | 8.11E−03 | 7.53E−07 | 3.99E−06 | 2.59E−06 | 7.86E−06 |
 Porphyromonas_uenonis | 4.41E−04 | 1.32E−02 | 7.70E−07 | 2.88E−06 | 1.19E−06 | 3.73E−06 |
 Citrobacter_koseri | 4.81E−04 | 1.38E−02 | 2.49E−05 | 5.29E−05 | 8.09E−05 | 1.87E−04 |
 Desulfovibrio_piger | 5.27E−04 | 1.44E−02 | 1.14E−04 | 3.37E−04 | 3.15E−04 | 7.13E−04 |
 Klebsiella_sp_1_1_55 | 7.03E−04 | 1.62E−02 | 3.14E−06 | 8.91E−06 | 7.58E−06 | 1.77E−05 |
 Enterococcus_gallinarum | 6.76E−04 | 1.62E−02 | 2.62E−07 | 8.17E−07 | 1.48E−05 | 8.63E−05 |
 Salmonella_enterica | 6.49E−04 | 1.62E−02 | 4.29E−05 | 9.78E−05 | 1.49E−04 | 4.36E−04 |
 Erwinia_amylovora | 8.12E−04 | 1.71E−02 | 1.23E−08 | 5.96E−08 | 8.77E−07 | 3.02E−06 |
 Sodalis_glossinidius | 8.15E−04 | 1.71E−02 | 3.44E−07 | 2.09E−06 | 1.55E−06 | 5.56E−06 |
 Acinetobacter_radioresistens | 8.57E−04 | 1.74E−02 | 1.15E−08 | 7.82E−08 | 5.84E−06 | 3.50E−05 |
 Fusobacterium_varium | 1.00E−03 | 1.97E−02 | 1.62E−04 | 6.01E−04 | 2.49E−03 | 1.31E−02 |
 Acidaminococcus_intestini | 1.06E−03 | 2.02E−02 | 1.14E−06 | 3.45E−06 | 1.99E−04 | 8.37E−04 |
 Prevotella_amnii | 1.28E−03 | 2.37E−02 | 6.72E−07 | 3.56E−06 | 3.56E−06 | 1.87E−05 |
 Yersinia_enterocolitica | 1.32E−03 | 2.38E−02 | 4.48E−08 | 2.69E−07 | 7.96E−07 | 4.09E−06 |
 unclassified_Fusobacterium | 1.89E−03 | 2.90E−02 | 7.79E−06 | 1.68E−05 | 4.58E−05 | 1.52E−04 |
 unclassified_Prevotella_sp._oral_taxon_299 | 1.79E−03 | 2.90E−02 | 2.17E−08 | 1.18E−07 | 4.34E−07 | 1.92E−06 |
 Anaerococcus_vaginalis | 1.81E−03 | 2.90E−02 | 1.11E−06 | 4.26E−06 | 1.46E−06 | 2.81E−06 |
 Shewanella_putrefaciens | 1.84E−03 | 2.90E−02 | 7.68E−08 | 2.12E−07 | 3.60E−06 | 2.05E−05 |
 Fusobacterium_nucleatum | 2.53E−03 | 3.79E−02 | 3.40E−07 | 8.82E−07 | 3.33E−06 | 1.74E−05 |
 Escherichia_sp_TW11588 | 3.22E−03 | 4.61E−02 | 2.76E−07 | 1.75E−06 | 1.25E−06 | 3.63E−06 |
Decreased in postmenopausal breast cancer patients | ||||||
 Eubacterium_eligens | 1.05E−04 | 4.42E−03 | 4.02E−03 | 5.95E−03 | 1.46E−03 | 3.84E−03 |
 Escherichia_albertii | 7.21E−04 | 1.62E−02 | 1.28E−05 | 8.26E−05 | 9.96E−06 | 4.44E−05 |
 Campylobacter_concisus | 6.80E−04 | 1.62E−02 | 1.51E−05 | 4.24E−05 | 2.05E−06 | 4.30E−06 |
 unclassified_Enterobacteriaceae_bacterium_9_2_54FAA | 1.45E−03 | 2.53E−02 | 1.04E−05 | 4.38E−05 | 1.00E−05 | 1.78E−05 |
 Roseburia_inulinivorans | 1.89E−03 | 2.90E−02 | 3.69E−03 | 3.72E−03 | 2.64E−03 | 5.39E−03 |
 Brucella_melitensis | 3.15E−03 | 4.61E−02 | 1.83E−06 | 1.23E−05 | 5.73E−07 | 1.49E−06 |
 Lactobacillus_vaginalis | 3.44E−03 | 4.81E−02 | 4.32E−05 | 2.89E−04 | 7.07E−06 | 2.97E−05 |