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Table 1 Summary of all the results obtained in combination between Hugon et al.’s previous work and the present repertoire. Pathogenicity is represented as previously mentioned according to its risk group. Risk group 1 category refers to no or low individual and community risk, risk group 2 refers to species with moderate individual risk and a low community risk, risk group 3 represents species with high individual risk and a low community risk, risk group 4 being of a high individual and community risk, and unclassified refers to species that were not found in the risk group database

From: The contribution of culturomics to the repertoire of isolated human bacterial and archaeal species

  Hugon et al., 2015 [27] Present work
Risk group 1 2042 2042
Risk group 2 103 112
Risk group 3 27 28
Risk group 4 0 0
Unclassified 0 594
Strictly anaerobic total 386 662
Strictly anaerobic gut 244 459
Actinobacteria 558 696
Bacteroidetes 155 216
Chlamydiae 8 9
Cyanobacteria 0 1
Deferribacteres 0 1
Deinococcus-Thermus 1 1
Euryarchaeota 9 10
Firmicutes 676 962
Fusobacteria 25 29
Lentisphaerae 1 1
Proteobacteria 641 740
Spirochaetes 60 66
Synergistetes 4 7
Tenericutes 31 34
Verrucomicrobia 1 1
Unclassified 2 2
Total 2172 2776