Table 3 Highly discriminative genera for predicting seasons by random forest test
From: Seasonal, spatial, and maternal effects on gut microbiome in wild red squirrels
Genera | Mean % increase in error on removal (± SD) | Relative abundance in early spring/late spring/summer |
|---|---|---|
Oscillospira | 21.88 (± 1.22) | 2.6%/15.4%/1.4% |
Butyricicoccus | 11.97 (± 1.33) | 0.12%/0.29%/0.03% |
Coprococcus | 11.92 (± 1.04) | 13.0%/6.3%/22.8% |
Unclassified Ruminococcaceae | 10.40 (± 0.81) | 10.3%/9.2%/7.5% |
Clostridium | 10.26 (± 1.22) | 1.9%/5.4%/4.0% |
Unclassified Coriobacteriaceae | 5.1 (± 0.76) | 0.015%/0.05%/0.004% |
Faecalibacterium | 4.89 (± 0.45) | 1.1%/2.0%/1.0% |
Ruminococcus | 4.44 (± 0.54) | 0.7%/1.3%/0.6% |
Parabacteroides | 4.02 (± 0.49) | 0.18%/0.05%/0.14% |