From: The lung tissue microbiota of mild and moderate chronic obstructive pulmonary disease
Subject | Site | Raw sequences | Trimmeda | Full data set sequencesb |
---|---|---|---|---|
1 | Oral | 1,221,461 | 1,200,471 | 1,179,919 |
1 | Nasal | 894,311 | 875,853 | 730,412 |
1 | Bronchial | 720,011 | 697,567 | 8380 |
1 | Lung tissue | 1,995,525 | 1,917,602 | 5978 |
2 | Oral | 1,756,838 | 1,718,429 | 1,682,345 |
2 | Nasal | 940,535 | 916,270 | 26,571 |
2 | Bronchial | 2,268,600 | 2,130,104 | 2811 |
2 | Lung tissue | 1,965,320 | 1,849,877 | 4270 |
3 | Oral | 2,011,911 | 1,973,158 | 1,907,839 |
3 | Nasal | 1,181,978 | 1,155,811 | 818,142 |
3 | Bronchial | 1,649,122 | 1,599,897 | 10,906 |
3 | Lung tissue | 1,649,943 | 1,573,465 | 4104 |
4 | Oral | 720,179 | 709,279 | 697,399 |
4 | Nasal | 825,382 | 795,668 | 342,890 |
4 | Bronchial | 1,031,715 | 404,201 | 1050 |
4 | Lung tissue | 1,065,648 | 113,879 | 1068 |
5 | Oral | 593,186 | 581,011 | 574,101 |
5 | Nasal | 602,148 | 591,781 | 562,469 |
5 | Bronchial | 997,054 | 232,540 | 582 |
5 | Lung tissue | 716,643 | 83,992 | 684 |
6 | Oral | 483,289 | 470,953 | 463,259 |
6 | Nasal | 619,329 | 365,827 | 253,711 |
6 | Bronchial | 945,424 | 9583 | 691 |
6 | Lung tissue | 828,782 | 18,768 | 563 |
7 | Oral | 899,992 | 885,538 | 868,523 |
7 | Nasal | 624,109 | 571,341 | 378,236 |
7 | Bronchial | 671,694 | 56,354 | 859 |
7 | Lung tissue | 781,672 | 39,506 | 931 |
8 | Oral | 658,356 | 646,638 | 638,699 |
8 | Nasal | 582,451 | 451,154 | 439,653 |
8 | Bronchial | 1,063,865 | 297,224 | 1103 |
8 | Lung tissue | 10,670 | 1307 | 35 c |
9 | Oral | 808,428 | 798,595 | 789,718 |
9 | Nasal | 1,054,717 | 304,938 | 264,946 |
9 | Bronchial | 1,286,746 | 275,686 | 2161 |
9 | Lung tissue | 653,161 | 87,316 | 1998 |
Control | 1 | 19,266 | 274 | 115 |
Control | 2 | 79,459 | 1956 | 820 |
Control | 3 | 22,596 | 232 | 103 |
Control | 4 | 24,344 | 188 | 75 |
Control | 5 | 21,875 | 348 | 134 |
Control | 6 | 23,358 | 254 | 111 |
Total countd | 12,667,009 | |||
Mediand | 18,739 | |||
Meand | 351,861 |