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Table 1 Discontinuous MegaBLAST results for the rRNA consensus operons

From: Profiling bacterial communities by MinION sequencing of ribosomal operons

NCBI top hit Phylum Bacterium x coverage Size (bp) 16S % ID* Overlap*
gi|270610434|gb|GU187030.1| Acidobacteria Acidobacteria bacterium IGE-003 91 4022 83.8 ± 3.1 1345 ± 161
gi|584432076|gb|KF840371.1| Acidobacteria Stenotrophobacter terrae 59 4269 82.6 ± 5.0 1445 ± 83
gi|270610434|gb|GU187030.1|| Acidobacteria Acidobacteria bacterium IGE-003 *** 56 4088 90.0 ± 4.7 622 ± 251
gi|270610434|gb|GU187030.1| Acidobacteria Acidobacteria bacterium IGE-003 *** 37 3933 84.7 ± 2.7 1324 ± 128
gi|645321086|ref|NR_118138.1| Actinobacteria Gaiella occulata 444 4006 86.6 ± 2.6 1483 ± 69
gi|283945692|gb|CP001854.1| Actinobacteria Conexibacter woesei 161 4148 88.3 ± 3.7 1472 ± 85
gi|631251774|ref|NR_112972.1| Actinobacteria Aciditerrimonas ferrireducens 98 3803 87.6 ± 1.4 1497 ± 33
gi|772393478|gb|KP174569.1 Actinobacteria Iamia majanohamensis 50 4257 87.2 ± 1.6 1509 ± 41
gi|566084828|ref|NR_108192.1| Actinobacteria Solirubrobacter ginsenosidimutans 45 3655 86.1 ± 3.5 1446 ± 88
gi|343200946|ref|NR_041633.1| Actinobacteria Ilumatobacter fluminis 41 4167 89.3 ± 1.9 1279 ± 38
gi|294768454|gb|GU905013.1| Firmicutes Enterococcus sp. CSL 7544–3 68 4167 96.7 ± 2.1 1491 ± 52
gi|219846897|ref|NR_026489.1| Firmicutes Vagococcus fluvialis 46 4153 97.0 ± 2.1 1489 ± 51
gi|37961728|gb|AY234571.1| Gemmatimonadetes Bacterium Ellin5220 316 3611 84.0 ± 2.7 1039 ± 6
gi|68146509|emb|AJ867290.1| Proteobacteria-alpha Ochrobactrum anthropi 61 4567 98.2 ± 0.8 1530 ± 24
gi|219878237|ref|NR_025376.1 Proteobacteria-beta Comomonas nitrativorans 941 4623 94.4 ± 1.0 1496 ± 40
gi|111378460|gb|DQ836252.1| Proteobacteria-beta Comomonas denitrificans 384 4585 96.3 ± 1.4 1501 ± 43
gi|698376506|gb|KM210263.1| Proteobacteria-beta Castellaniella sp. ADC-27 118 4652 95.2 ± 1.5 1502 ± 51
gi|589264544|emb|HG916765.1| Proteobacteria-beta Castellaniella defragrans 88 4519 95.1 ± 1.4 1513 ± 43
gi|343201701|ref|NR_042427.1| Proteobacteria-beta Acidovorax caeni 80 4432 95.4 ± 0.8 1521 ± 30
gi|937501645|gb|KR136349.1| Proteobacteria-beta Achromobacter xylosoxidans 70 4093 97.6 ± 0.2 1521 ± 16
gi|219878311|ref|NR_025450.1| Proteobacteria-beta Bacterium Ellin6067 39 3967 85.5 ± 0.4 1551 ± 10
gi|410994849|gb|CP003920.1| Proteobacteria-epsilon Sulfuricurvum kujiense 148 4453 89.1 ± 3.7 1499 ± 45
gi|54887524|emb|AJ786786.1| Proteobacteria-gamma Xanthomonas sp. R-20819 1951 4479 95.1 ± 1.0 1521 ± 27
gi|28170769|dbj|AB101447.1| Proteobacteria-gamma Xanthomonas axonopodis 352 4471 94.7 ± 1.0 1531 ± 27
gi|828983113|gb|CP011657.1| Proteobacteria-gamma Citrobacter freundii CAV1741 244 4248 98.2 ± 0.3 1534 ± 11
gi|938169631|gb|CP012900.1| Proteobacteria-gamma Stenotrophomonas acidaminiphila 161 4272 92.5 ± 0.5 1253 ± 5
gi|28170769|dbj|AB101447.1| Proteobacteria-gamma Xanthomonas axonopodis *** 113 4367 94.2 ± 1.2 1457 ± 30
gi|927043620|gb|CP012554.1| Proteobacteria-gamma Citrobacter freundii P10159 80 4177 97.9 ± 0.4 1536 ± 14
gi|927043620|gb|CP012554.1| Proteobacteria-gamma Citrobacter freundii P10159 *** 55 4286 97.2 ± 0.3 1540 ± 11
gi|636559888|ref|NR_115948.1| Proteobacteria-gamma Lysobacter dokdonensis 38 4361 93.7 ± 0.5 1545 ± 16
  1. *Averages ± stdev from the top 100 BLAST hits from the NR database; *** 16S rRNA genes with different top Discontinuous MegaBLAST hits using the 16S rRNA gene and NR databases