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Fig. 2 | Microbiome

Fig. 2

From: Presence of pathogenic Escherichia coli is correlated with bacterial community diversity and composition on pre-harvest cattle hides

Fig. 2

Beta diversity comparison of the bacterial communities by EHEC testing status and number of EHEC serogroups for the all hide OTUs (AHO) dataset. Jackknifed principal coordinate analysis using the unweighted UniFrac metric was performed on all hide sequences with 100 jackknifes of 95 % of the reads of the smallest sample within that metadata category. a Samples pooled by EHEC testing status into four groups: EHEC negative, E. coli O157 positive, non-O157 positive and positive for both E. coli O157, and any of the tested non-O157 serogroups. b Samples pooled by number or EHEC serogroups present in each sample. Percentage of variation explained by principal coordinate shown on each of the axis

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Microbiome

ISSN: 2049-2618

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