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Figure 2 | Microbiome

Figure 2

From: Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis

Figure 2

Effect of DMC sampling on the selex dataset. The first column shows the results when the data is clr transformed without DMC sampling, the next three show the effect of 1, 16 and 128 DMC samples followed by the clr transformation. Features that pass a threshold P<0.05 are shown in cyan and those where the fdr statistic is <0.05, are shown in red. Features where the median clr value is below the geometric mean are highlighted in black if they are not significant. Those where the median clr value is greater than the geometric mean are shown in gray. clr, centered log-ratio; DMC, Dirichlet Monte Carlo.

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Microbiome

ISSN: 2049-2618

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