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Table 4 Genome summaries

From: Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants

Taxa Bin no. bp Contigs N50 % GC Cvg % SCG
Infant 1:
Bacteroides fragilis 6 4,551,095 39 249,654 43.3 1,930.3 99
Bacteroides phage1 4 205,842 1 205,842 41.9 2,221.4 0
Bacteroides phage2 5 144,903 1 144,903 42.0 2,060.8 0
Enterococcus faecalis 8 2,649,897 93 40,945 37.8 7.6 99
Clostridium ramosum 7 3,630,043 63 78,436 31.4 23.5 99
Escherichia coli 3 5,035,302 53 218,574 50.5 1,254.1 57
Klebsiella pneumoniae 1 5,447,442 78 189,741 57.3 345.0 37
Staphylococcus epidermidis plasmid 2 20,739 2 11,095 31.5 14.5 0
Infant 2:
Actinomyces neuii strain 1 18 1,580,717 37 280,583 56.9 15.6 27
Actinomyces neuii strain 2 24 2,375,188 27 179,095 56.7 17.6 70
Actinomyces sp. 6 2,666,449 11 345,356 59.3 55.4 99
Anaerococcus prevotii 1 1,599,845 13 225,571 33.1 39.2 99
Caudovirales bacteriophage 26 18,308 1 18,308 29.5 1,169.7 0
Dermabacter sp. 4 2,040,279 12 289,797 62.8 51.9 90
Enterococcus faecalis 9 3,011,019 26 499,183 37.1 147.3 99
Enterococcus faecalis phage 14 335,286 39 12,896 34.8 103.7 0
Enterococcus faecalis plasmid 22 8,514 2 4,866 30.4 90.6 0
Finegoldia magna 7 1,729,913 42 78,482 32.0 93.0 99
Finegoldia phage 25 3,168 1 3,168 32.3 138.5 0
Finegoldia plasmid 1 23 7,589 2 3,969 33.0 103.4 0
Finegoldia plasmid 2 21 28,958 3 15,674 55.4 10.9 0
Pseudomonas aeruginosa 5 6,755,599 64 212,603 66.0 51.5 99
Staphylococcus epidermidis 10 1,902,759 82 40,484 33.0 65.4 7
Staphylococcus epidermidis mobile 17 55,503 10 6,452 31.7 54.5 43
Staphylococcus epidermidis phage 2 11 19,082 2 12,983 29.4 84.3 0
Staphylococcus epidermidis strain 3 81,754 9 14,965 29.4 67.1 0
Staphylococcus phage 1 13 216,785 13 8,080 29.5 45.7 0
Staphylococcus phage 2 16 198,742 14 20,782 0.3 79.3 0
Staphylococcus phage 3 and plasmid 15 137,609 12 19,343 29.3 67.8 0
Staphylococcus warneri 8 2,363,750 22 198,467 32.8 33.9 53
Veillonella sp. 2 2,281,484 223 12,637 37.8 56.2 70