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Fig. 2 | Microbiome

Fig. 2

From: Exposing new taxonomic variation with inflammation — a murine model-specific genome database for gut microbiome researchers

Fig. 2

CBA/J mouse database (CBAJ-DB) genomic methods and composition. A Circle plot shows the number of medium and high quality (MQHQ) metagenome assembled genomes (MAGs) reconstructed from CBA/J mouse gut metagenomes and corresponding assembly method and assembly software. B Completeness and contamination of all MQHQ MAGs colored by sample treatment origin (brown = infected; green = uninfected; purple = co-assembly) are shown by box plots, with bold horizontal lines indicating median across all MQHQ MAGs. C Circle plot shows the number of viral metagenome assembled genomes (vMAGs) reconstructed from CBA/J mouse gut metagenomes and corresponding assembly method and assembly software. D Dereplicated MQHQ (dMQHQ) MAG phylum distribution is shown by sequential colored rings listed from least specific (Domain, D) to most specific (Species, S) moving outwards from the plot center. Gaps at each taxonomic level represent MAGs that are previously undescribed. The outer ring is labeled with the number of MAGs from the dMQHQ CBAJ-DB database within each Phylum

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