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Fig. 5 | Microbiome

Fig. 5

From: Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

Fig. 5

Example heatmap depicting different clusters and/or trophic networks present. Here, the Turkish ethnicity and its machine learning results are included. The colors of the dendrogram include ASVs that were found in the machine learning model distinguishing the 1st from the 2nd migration generation. The colors of the sidebars depict whether the median abundance of the ASV is higher in the 1st or 2.nd generation. The heatmap itself consists of the spearman ρ correlation values of the ASVs, which are due to hierarchical clustering split up in different blocks consisting of clusters of ASVs. Based on previous analyses, the central Prevotella cluster can be divided into the P. copri and P. stercorea trophic network [27]. The Christensenellaceae, Methanobrevibacter, and Oscillibacter cluster is also considered a trophic network based on cross-feeding interaction knowledge [28, 38]

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