Cluster ID\(^1\) | Closest ARG\(^2\) | Host | Host\(^3\) | Associated | Co-localized | Environments\(^4\) |
---|---|---|---|---|---|---|
ARG class | [% identity] | phyla | species | MGE/integron | ARGs | |
Tetracyclines | ||||||
C8 RPG | Tet(W/N/W) | Act, | Collinsella sp., | MPF\(_{\textrm{FATA}}\), MOB\(_{\textrm{Q}}\) | erm(B) | Birds, Bovine, |
[12] | [80%] | Firmicutes | LActinobacteriaobacillus sp. | Humans, Mice, | ||
Pigs, Wastewater | ||||||
C7 RPG | Tet(44) | Pro, | Campylobacter fetus [P] | MPF\(_{\textrm{FATA}}\), | Birds, Bovine, | |
[2] | [86%] | Firmicutes | MOB\(_{\textrm{Q}}\), MOB\(_{\textrm{P1}}\) | Humans, Mice, Pigs | ||
C10 RPG | Tet(32) | Firmicutes | Clostridium clostridioforme, | MPF\(_{\textrm{FA}}\), MOB\(_{\textrm{P}1}\) | Birds, Bovine, | |
[7] | [76%] | Dorea formicigenerans, | Mice, Pigs | |||
C14 RPG | Tet(32) | Firmicutes | Acetatifactor muris, | MPF\(_{\textrm{FATA}}\), MOB\(_{\textrm{Q}}\), | Birds, Bovine, | |
[3] | [88%] | Blautia coccoides | MOB\(_{\textrm{P1}}\) | Humans, Mice, Pigs | ||
\(\beta\)-lactams | ||||||
C34 A | CepA-44 | Bacteroidetes | Bacteroides vulgatus [P], | Humans | ||
[31] | [54%] | Bacteroides massiliensis [P] | ||||
C46 A | cepA | Bacteroidetes | Bacteroides caecimuris, | MPF\(_{\textrm{FA}}\), | Mice | |
[11] | [41%] | Parabacteroides distasonis | MPF\(_{\textrm{FATA}}\) | |||
C35 A | CfxA3 | Bacteroidetes | Bacteroides fragilis [P], | MPF\(_{\textrm{B}}\) | Humans, Pigs, | |
[8] | [84%] | Bacteroides eggerthii | Respiratory system | |||
C37 A | CfxA6 | Bacteroidetes | Bacteroides vulgatus [P], | MOB\(_{\textrm{B}}\) | Pigs | |
[3] | [81%] | Bacteroides ovatus | ||||
C30 C | ACC-7 | Proteobacteria | Thauera humireducens, | Class 1 integrase, | tet(G) | Activated |
[3] | [47%] | Thauera sp. | IS91-family transposase | sludge, Wastewater | ||
C22 C | ADC-221 | Proteobacteria | Acinetobacter baumannii [P], | MOB\(_{\textrm{Q}}\) | bla\(_{\mathrm {OXA-58}}\) | Wastewater |
[6] | [61%] | Acinetobacter bereziniae | ||||
C89 D | OXA-209 | Bacteroidetes | Myroides odoratimimus [P] | MPF\(_{\textrm{B}}\) | bla\(_{\mathrm {OXA-347}}\), | Wastewater |
[1] | [89%] | tet(X) | ||||
C94 D | OXA-209 | Bacteroidetes | Vaginella massiliensis | tet(X4) | Wastewater | |
[1] | [73%] | |||||
Macrolides | ||||||
C50 erm | Erm(42) | Firmicutes, | Anaerofustis stercorihominis, | MPF\(_{\textrm{FA}}\) | Birds, Bovine, | |
[6] | [48%] | Proteobacteria | Dechloromonas aromatica, | Pigs, Wastewater | ||
C41 erm | Erm(42) | Firmicutes, | Salmonella enterica [P], | MPF\(_{\textrm{FATA}}\), | Birds | |
[4] | [42%] | Proteobacteria | Eubacterium rectale | MOB\(_{\textrm{Q}}\), MOB\(_{\textrm{P1}}\) | ||
C105 erm | Erm(F) | Bacteroidetes | Bacteroides fragilis [P], | MPF\(_{\textrm{B}}\), MOB\(_{\textrm{P1}}\) | tet(Q) | Wastewater |
[3] | [63%] | Alistipes onderdonkii | ||||
C38 erm | Erm(42) | Firmicutes | Solobacterium sp. | MPF\(_{\textrm{FA}}\), MPF\(_{\textrm{FATA}}\), | Pigs | |
[5] | [49%] | MOB\(_{\textrm{V}}\) | ||||
C109 erm | Erm(X) | Actinobacteria | Corynebacterium dentalis, | MOB\(_{\textrm{F}}\) | Birds | |
[2] | [57%] | Trueperella pyogenes | ||||
C67 mph | Mph(E) | Bacteroidetes | Myroides odoratimimus [P] | MOB\(_{\textrm{P1}}\) | Wastewater | |
[1] | [83%] | |||||
Aminoglycosides | ||||||
C87 aac(3) | AAC(3’)-IXa | Firmicutes | Lactobacillus amylovorus, | MOB\(_{\textrm{T}}\) | Birds, Pigs | |
[13] | [30%] | Lactobacillus gallinarum | ||||
C132 aac(6’) | AAC(6’)-Iad | Firmicutes | Clostridioides difficile [P] | MPF\(_{\textrm{FATA}}\), | Pigs | |
[2] | [56%] | MOB\(_{\textrm{Q}}\) | ||||
C130 aac(6’) | AAC(6’)-Im | Firmicutes | Ruminococcus flavefaciens, | MPF\(_{\textrm{FATA}}\) | Bovine | |
[14] | [55%] | Butyrivibrio sp. | ||||
C128 aac(6’) | AAC(6’)-Ib7 | Proteobacteria | Pseudomonas aeruginosa [P] | Class 1 integron | aac(6’)-31, aadA6, | Birds, |
[1] | [74%] | sul1, bla\(_{\mathrm {OXA-2}}\) | Wastewater | |||
C84 aph(3’) | APH(\(3^{\prime \prime }\))-Ib | Proteobacteria | Vibrio cholerae [P] | aph(6)-Id | Birds, Activated | |
[1] | [89%] | sludge, Wastewater |