Fig. 5
From: Mycorrhiza-mediated recruitment of complete denitrifying Pseudomonas reduces N2O emissions from soil
Metagenomic analysis of Pseudomonas fluorescens involved in the N2O reduction process (A) and carbon metabolism (B, C) at the second harvest from pot Expt 2. A Relative abundance of major taxonomic groups at the species level of N2O-reducing community between the −AMF and +AMF treatments (n = 5). The top 1–15 abundances are shown. B Linear discriminant analysis effect size (LEfSe) identifying the significantly different functions involved in carbon metabolism between the −AMF and +AMF treatments (n = 5). Only taxa meeting a linear discriminant analysis (LDA) significance threshold of > 2 are shown. C Percentages of P. fluorescens involved in the citrate cycle (TCA cycle) between the −AMF and +AMF treatments (n = 5). Asterisks, significant differences between –AMF and +AMF treatments according to the Wilcoxon rank sum test (*, P < 0.05). The box plots show the 25–75th percentiles (box), the median and the mean (the band and the dot inside the box), and the minimum to maximum values excluding outliers (whiskers)