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Fig. 1 | Microbiome

Fig. 1

From: Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits

Fig. 1

Maximum-likelihood phylogenomic tree of bacterial metagenome-assembled genomes, constructed using 120 bacterial marker genes in GTDB-Tk. Major taxonomic groups are highlighted, and the number of MAGs in each taxon is shown in parentheses. See Table S2 for details. Bacterial lineages are shown at the phylum classification, except for the Proteobacteria which are split into their component classes. The inner ring displays quality (green: high quality, > 90% completion, < 5% contamination; purple: medium quality, ≥ 50% completion, ≤ 10% contamination), while the outer ring shows normalized read coverage up to 200x. The scale bar indicates 0.1 amino acid substitutions per site, and filled circles are shown for SH-like support values ≥ 80%. The tree was artificially rooted with the Patescibacteria using iTOL. The Newick format tree used to generate this figure is available in Data S4, and the formatted tree is available online at https://itol.embl.de/shared/alrlab

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