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Fig. 1 | Microbiome

Fig. 1

From: Staphylococcus aureus populations from the gut and the blood are not distinguished by virulence traits—a critical role of host barrier integrity

Fig. 1

Phylogeny of the 164 BI and GI study isolates. The approximate maximum likelihood phylogeny of the study isolates and the reference strain is shown on the left. Leaves are colored by sequence type as defined in the central legend. The inner ring indicates the isolate source (blue BI, yellow GI), and the outer ring indicates the identified clonal complexes. The arrows indicate the position in the phylogeny of the six isolates that were selected for proteome analyses. The tree and metadata can be found in https://microreact.org/project/5KbM9pyLS5gwpihFXi5ncV-raineri-et-al-2022. Clusters shown on the right are based on the pangenome analysis and were identified with Panini v1.7.1 [1] and Poppunk v2.4.0. using the DBSCAN model

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