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Fig. 5 | Microbiome

Fig. 5

From: Multi-genome metabolic modeling predicts functional inter-dependencies in the Arabidopsis root microbiome

Fig. 5

Minimal combinations of GEMs needed to produce TPPM. A Summary of the number of combinations of GEMs able to produce TPPM, for all TPPM together, amino acids only, vitamins only, and phytohormones only. B Details of producible and unproducible TPPM with single GEM capacities (red) and added values of combinations with metabolic completions (green). TPPM and nutritional constraints are ordered in the same way as in panel A. Results are given for each nutritional constraint (black: poor, red: rich), without (plain) or with (bold) ARE. The list of nutritional constraints varies depending on the TPPM considered, in accordance with the no-TPPM-in-media condition (i.e., growth media containing TPPM in their composition were excluded when necessary). On all axes in all the figures, poor media are labeled in black, rich media in red, ARE-enriched media in bold, and standard media in plain text

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Microbiome

ISSN: 2049-2618

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