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Table 1 Genome features of the MAGs from the 30 prokaryotic species analyzed in this study

From: Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome

Class

Species-level taxonomic affiliation of MAGs

Nª MAGs

Genome size Mb

GC content %

N° of coding Sequences

Complete-ness %

Contami-nation %

Mollicutes

Metamycoplasmataceae (DT-68 sp.)

3

0.63 ± 0.13

22.33 ± 0.72

685 ± 63

84.07 ± 17.26

0.08 ± 0.14

Chlamydiia

Ca. Rhabdochlamydiaceae (SZUA-160 sp.)

1

0.88

44.38

1015

60.07

0.00

Gammaproteobacteria

Ca. Gorgonimonas eunicellae

7

2.79 ± 0.13

29.68 ± 0.05

2177 ± 121

73.17 ± 1.38

1.52 ± 0.96

Ca. Gorgonimonas leptogorgiae

4

3.15 ± 0.60

29.77 ± 0.29

2603 ± 355

70.20 ± 4.15

1.06 ± 0.40

Ca. Thiocorallibacter gorgonii

2

1.41 ± 0.16

29.19 ± 0.17

2612 ± 6

90.95 ± 6.72

1.24 ± 0.35

Ca. Microaerophilica antagonistica

4

1.85 ± 0.12

37.47 ± 0.07

1763 ± 101

93.05 ± 2.33

0.82 ± 0.50

Pseudomonadales (DT-91 sp.)

2

3.29 ± 0.52

40.98 ± 0.09

3505 ± 240

77.02 ± 18.70

1.35 ± 1.90

Cardiobacteriales sp.

2

2.50 ± 0.20

42.72 ± 0.05

2560 ± 145

85.7 0 ± 6.34

0.57 ± 0.00

Luminiphilus sp009886815

3

3.19 ± 0.48

52.79 ± 0.19

3307 ± 580

85.67 ± 10.49

3.39 ± 1.10

Alphaproteobacteria

Ruegeria sp. (EG16H_Bin1)

1

2.49

56.18

3405

55.03

0.38

Ruegeria sp900313035

1

4.16

56.55

4564

87.01

1.38

Yoonia sp. (EG16N_Bin1)

1

3.62

56.98

3750

99.39

0.38

Yoonia sp. (EG16N_Bin5)

1

2.69

53.45

2878

95.52

1.22

Yoonia sp. (EV01H_Bin2)

1

3.05

57.15

3798

83.28

1.47

Aliiroseovarius sp. (EG18N_Bin4)

1

2.06

51.31

2606

70.61

1.13

Planktomarina sp002683685

4

2.28 ± 0.26

54.87 ± 0.07

2392 ± 105

93.47 ± 7.83

0.87 ± 0.70

Amylibacter sp900197625

4

1.70 ± 0.27

37.10 ± 0.70

1855 ± 183

75.16 ± 14.49

1.54 ± 1.37

Rhodobacteraceae (LGRT01 sp001642945)

3

2.91 ± 0.05

51.36 ± 0.05

2903 ± 27

96.36 ± 0.81

0.36 ± 0.19

Ca. Parvibaculales (UBA8337 sp900197605)

2

1.35 ± 0.03

54.77 ± 0.02

1646 ± 37

80.11 ± 3.25

1.74 ± 0.00

Lentilitoribacter sp900537175

1

3.63

44.39

3580

97.27

0.52

Unclassified Rhizobiaceae (EG18N_Bin5)

1

2.79

58.16

2656

98.96

0.08

Unclassified Rhizobiaceae (EG18N_Bin7)

1

2.58

41.22

2613

93.88

0.2

Ca. Inquilinaceae (JAAAOG01 sp.)

1

4.23

59.61

5446

68.01

0.44

Unclassified Alphaproteobacteria

2

1.67 ± 0.20

50.03 ± 0.16

1668 ± 224

89.25 ± 4.56

0.81 ± 0.38

Flavobacteriia

Aquimarina sp. (EG16N_Bin3)

1

3.83

32.22

3501

93.00

0.67

Flavobacteriaceae MS024-2A sp002167945

1

1.49

37.84

1570

66.19

2.73

Flavobacteriaceae (MS024-2A sp002292265)

1

1.39

41.03

1492

74.42

2.26

Schleiferiaceae (UBA10364 sp002387615)

4

1.83 ± 0.07

44.29 ± 0.04

1796 ± 71

95.44 ± 2.09

0.62 ± 0.34

Verrucomicrobiae

Akkermansiaceae (UBA985 sp003527555)

5

2.57 ± 0.79

48.44 ± 0.71

2410 ± 376

88.6 5 ± 18.1

1.13 ± 0.39

Poseidoniia

Ca. Poseidoniaceae (MGIIa-L1 sp.)

1

1.56

52.10

1772

61.82

1.60

  1. *For species with more than one MAG, average values and standard deviations are shown