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Fig. 7 | Microbiome

Fig. 7

From: Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR

Fig. 7

Maximum likelihood (LG + F + G4, general matrix with empirical codon frequencies counted from data and discrete Gamma model with 4 rate categories) phylogeny for rhodopsins. CPR rhodopsins are marked with a red dot at the end of the tips. A total of 511 sequences were used to generate the tree (alignment length 792), including a database of 392 proteins from known rhodopsin families

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