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Fig. 5 | Microbiome

Fig. 5

From: Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR

Fig. 5

Metabolic map reconstruction for the Gracilibacteria class. Abbreviations for transporters: ABC—ATP-binding cassette, APC—amino acid-polyamine-organocation, MIT—metal ion transporter, MFS—major facilitator superfamily, MscL—large conductance mechanosensitive ion channel, PSTE—polysaccharide transporter. Abbreviations for compounds: 1,3BPG—1,3-bisphosphoglycerate, 2PG—2-phosphoglycerate, 3PG—3-phosphoglycerate, 5RP—ribulose 5-phosphate, 6PG—6-phosphogluconate, 6PGL—6-phoshoglucono lactone, DAHP—2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate, DHAP—dihydroxyacetone phosphate, DHQ—3-Dehydroquinate, dTDP—deoxythymidine diphosphate, dTDP-DXH—dTDP-6-deoxy-D-xylo-4-hexulose, EPSP—5-enolpyruvylshikimate-3-phosphate, F1,6P2—fructose 1,6-bisphosphate, F6P—fructose 6-phosphate, FAD—flavin adenine dinucleotide, FMN—flavin mononucleotide, G3P—glyceraldehyde 3-phosphate, G6P—glucose 6-phosphate, HTPA—(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinic acid, IMP—inosine monophosphate, LPS—lipopolysaccharides, NAD+—nicotinamide adenine dinucleotide, P—phosphate, PEP—phosphoenolpyruvate, PPi—pyrophosphate, PPRP—phosphoribosyl pyrophosphate, TDO—dTDP-4-oxo-L-rhamnose, THF—tetrahydrofolate, TXN—thioredoxin, TXN-S-S—thioredoxin disulfide, XMP—xanthosine monophosphate. Pathways or structural complexes: ETC—Electric transport chain, TCA—Tricarboxylic acid

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