Fig. 3
From: Immunogenetic variation shapes the gut microbiome in a natural vertebrate population
Effects MHC alleles, TLR3 genotype, genome-wide heterozygosity, and host variables on alpha diversity in 195 Seychelles warblers. Alpha diversity metrics are A Shannon diversity, B Chao1, and C Faith’s phylogenetic diversity (PD). Estimates and standard errors are based on linear conditional model-averaged estimates. An estimate >0 indicates increased alpha diversity, while <0 indicates decreased alpha diversity. Significant terms (P < 0.05) are highlighted in purple, and terms approaching significance (P < 0.1) are indicated with a purple point. Estimates are in reference to MHC allele = absent, TLR3 genotype = TLR3 AA, sex = female, age class = fledgling, field period = major 2017