Table 1 The carbon fixation metabolic traits of 15 tested bacterial and archaeal genomes predicted by both METABOLIC and KEGG genome database
METABOLIC result | KEGG genome pathway | ||||||
|---|---|---|---|---|---|---|---|
Carbon fixation | Carbon fixation | ||||||
Accession ID | Organism | KEGG Organism Code | Group | 3HP cycle | 3HP/4HB cycle | 3HP cycle | 3HP/4HB cycle |
GCA_000011905.1 | Dehalococcoides mccartyi 195 | det | Chloroflexi | Absent | Absent | Absent | Absent |
GCA_000017805.1 | Roseiflexus castenholzii DSM 13941 | rca | Chloroflexi | Present | Absent | Present | Absent |
GCA_000018865.1 | Chloroflexus aurantiacus J-10-fl | cau | Chloroflexi | Present | Absent | Present | Absent |
GCA_000021685.1 | Thermomicrobium roseum DSM 5159 | tro | Chloroflexi | Absent | Absent | Absent | Absent |
GCA_000021945.1 | Chloroflexus aggregans DSM 9485 | cag | Chloroflexi | Present | Absent | Present | Absent |
GCA_000299395.1 | Nitrosopumilus sediminis AR2 | nir | Thaumarchaeota | Absent | Present | Absent | Present |
GCA_000698785.1 | Nitrososphaera viennensis EN76 | nvn | Thaumarchaeota | Absent | Present | Absent | Present |
GCA_000875775.1 | Nitrosopumilus piranensis D3C | nid | Thaumarchaeota | Absent | Present | Absent | Present |
GCA_000812185.1 | Nitrosopelagicus brevis CN25 | nbv | Thaumarchaeota | Absent | Present | Absent | Present |
GCA_900696045.1 | Nitrosocosmicus franklandus NFRAN1 | nfn | Thaumarchaeota | Absent | Present | Absent | Present |
GCA_000015145.1 | Hyperthermus butylicus DSM 5456 | hbu | Crenarchaeota | Absent | Absent | Absent | Absent |
GCA_000017945.1 | Caldisphaera lagunensis DSM 15908 | clg | Crenarchaeota | Absent | Present | Absent | Present |
GCA_000148385.1 | Vulcanisaeta distributa DSM 14429 | vdi | Crenarchaeota | Absent | Absent | Absent | Absent |
GCA_000193375.1 | Thermoproteus uzoniensis 768-20 | tuz | Crenarchaeota | Absent | Present | Absent | Present |
GCA_003431325.1 | Acidilobus sp. 7A | acia | Crenarchaeota | Absent | Absent | Absent | Absent |