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Fig. 5 | Microbiome

Fig. 5

From: SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities

Fig. 5

Microbial composition (25 most common genus + others) amongst sample types and feeds. A Microbial composition within stomach compartment, B Microbial composition within pyloric caeca compartment, and C microbial composition within midgut compartment. The different sample types are represented by the labels on the x-axis: Real FMD (real salmon fed on Fishmeal: Fish 1, 2, and 3), Real FMF (real salmon fed on Fishmeal-free diet: Fish 4, 5, and 6), SalmoSim Fish 7–9 (SalmoSim biological replicate runs 1–3). Labels in blue represent samples fed on Fishmeal diet and in red samples fed on Fishmeal-free diet. For SalmoSim, only stable time points for each feed were selected: time points 16–20 for Fishmeal diet, and time points 36–40 for Fishmeal-free diet

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