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Fig. 1 | Microbiome

Fig. 1

From: ORFograph: search for novel insecticidal protein genes in genomic and metagenomic assembly graphs

Fig. 1

A subgraph of the SPAdes assembly graph of the SRR6238356 dataset reveals a large number of potential IPGs. Green edges represent a path that spells one out of ~3000 potential IPGs in this subgraph. All potential IPGs arising from this subgraph form four clusters and represent Cry1-like genes. The SPAdes assembly graph was constructed in the iterative mode with the default k-mer sizes (21, 33, 55). The subgraph was visualized using Bandage [65]

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