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Fig. 2 | Microbiome

Fig. 2

From: Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics

Fig. 2

C. parapsilosis strains have high copy number rRNA and RTA3 loci. A Whole genome windowed coverage of SNP density for C. parapsilosis strain C1_006. High copy number regions of interest are highlighted with red boxes. B An expanded view of highlighted high copy number regions from A. Windowed coverage is plotted as 100 bp sliding windows. Metagenome-derived hospital strains from this study labeled in red. C Boxplot of expression of the RTA3 gene from multicopy strain C1_006 in situ (blue) and strain CDC317 in culture (red). Expression represented as transcripts per million (TPM). Expression is significantly different between the two groupings (p = 0.004) as determined using the Wilcoxon ranked-sums test

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Microbiome

ISSN: 2049-2618

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