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Fig. 8 | Microbiome

Fig. 8

From: Microbial community characterization of shrimp survivors to AHPND challenge test treated with an effective shrimp probiotic (Vibrio diabolicus)

Fig. 8

T6SS1 in different species and strains. A multiple alignment of the T6SS1 region and 35Kb upstream and downstream were evaluated for 4 reference genomes. The figure shows the collinear blocks identified between the clinical strain (RIMD 2210633), the one that does not produce AHPND (NCKU_TN_S02) and the one that produces AHPND (BA94) of V. parahaemolyticus, and the strain of V. diabolicus ILI. Each gene from the T6SS1 is represented in the top segment with different colors, conservation of each gene and the upstream and downstream regions can be traces by the vertical lines. The ILI strain contains at least partially T6SS1, and the other part is found on chromosome II, which is why we call it T6SS2B. All V. parahaemolyticus strains analyzed in this study contain a highly conserved T6SS1. T6SS1 in ILI contains the effectors described for V. parahaemolyticus by Salomon et al. [47] shown in blue, purple, and orange boxes

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