Table 4 MS/MS supported proteins in the most expressed species in human gut microbiome
Sample | Most abundant | # putative | #proteins (≥1 spectrum) | #proteins (≥3 spectra) |
|---|---|---|---|---|
| Â | species | proteins | all(%)/with-annotation(%) | all(%)/with-annotation(%) |
HM403 | B. xylanisolvens | 5442 | 757 (13.9%)/536 (9.8%) | 437 (8.0%)/330 (6.0%) |
HM415 | B. fragilis | 5121 | 751 (14.7%)/534 (10.4%) | 403 (7.9%)/313 (6.1%) |
HM454 | B. vulgatus | 4415 | 740 (16.7%)/540 (12.2%) | 428 (9.7%)/346 (7.8%) |
HM455 | B. vulgatus | 4806 | 1,085 (22.6%)/744 (15.4%) | 668 (13.9%)/ 501 (10.4%) |
HM466 | B. vulgatus | 4415 | 784 (17.7%)/583 (13.2%) | 424 (9.6%)/344 (7.81%) |
HM467 | B. vulgatus | 4464 | 924 (20.6%)/659 (14.7%) | 543 (12.1%)/426(8.8%) |
HM494 | Clostridium_M | 3061 | 750 (24.5%)/556 (18.1%) | 438 (14.3%)/338 (11.0%) |
HM503 | B. ovatus | 4931 | 1,077 (21.8%)/737 (14.9%) | 578 (11.7%)/438 (8.8%) |