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Table 3 Results in analysis of the Alzheimer’s disease (AD) data

From: Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data

  p-value for testing the Number of OTUs
  community-level hypothesis detected at FDR 10%
  permanovaFL LDM DESeq2 LDM
Without adjustment of APOE 0.0001 0.0001 168 66
With adjustment of APOE 0.0069 0.0159 66 0